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Abstract. While the role of highly oxygenated molecules (HOMs) in new particleformation (NPF) and secondary organic aerosol (SOA) formation is not indispute, the interplay between HOM chemistry and atmospheric conditionscontinues to draw significant research attention. During the Influence ofBiosphere-Atmosphere Interactions on the Reactive Nitrogen budget (IBAIRN)campaign in September 2016, profile measurements of neutral HOMs below andabove the forest canopy were performed for the first time at the borealforest SMEAR II station. The HOM concentrations and composition distributionsbelow and above the canopy were similar during daytime, supporting awell-mixed boundary layer approximation. However, much lower nighttime HOMconcentrations were frequently observed at ground level, which was likely dueto the formation of a shallow decoupled layer below the canopy. Near theground HOMs were influenced by the changes in the precursors and oxidants andenhancement of the loss on surfaces in this layer, while the HOMs above thecanopy top were not significantly affected. Our findings clearly illustratethat near-ground HOM measurements conducted under stably stratifiedconditions at this site might only be representative of a small fraction ofthe entire nocturnal boundary layer. This could, in turn, influence thegrowth of newly formed particles and SOA formation below the canopy where thelarge majority of measurements are typically conducted.